BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F08SP1|AL425902
(798 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1130 1582 0.0
>3x_Contig1130
Length = 4826
Score = 1582 bits (798), Expect = 0.0
Identities = 798/798 (100%)
Strand = Plus / Plus
Query: 1 agcagggtcgattgatacattattacaagctgagaacttcgcagtggctcaattgattag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3517 agcagggtcgattgatacattattacaagctgagaacttcgcagtggctcaattgattag 3576
Query: 61 ttgccgattgtatagctggtaaaactttgatttattcaacagctttcagccactgtttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3577 ttgccgattgtatagctggtaaaactttgatttattcaacagctttcagccactgtttga 3636
Query: 121 atatgagtgatgagttgtacagaaaaacccaaaacaggatatacagcatgcaagagacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3637 atatgagtgatgagttgtacagaaaaacccaaaacaggatatacagcatgcaagagacac 3696
Query: 181 tgctgaatagttctagggagtccaaacaggcccgagatcaggatacgggtaaaatcggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3697 tgctgaatagttctagggagtccaaacaggcccgagatcaggatacgggtaaaatcggat 3756
Query: 241 catcatcatcagaagaagcagttgctgcaccggctaatacacagaatgttgcagatgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3757 catcatcatcagaagaagcagttgctgcaccggctaatacacagaatgttgcagatgaaa 3816
Query: 301 gttcccaaacaggggaacctgaaaacaacactacccttgaaactgcagctccagacagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3817 gttcccaaacaggggaacctgaaaacaacactacccttgaaactgcagctccagacagca 3876
Query: 361 aacctgaagatgacgaagacgaaatagacgtaaactctaaatctgtccttgaatatacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3877 aacctgaagatgacgaagacgaaatagacgtaaactctaaatctgtccttgaatatacag 3936
Query: 421 agaagaattacgcactacagcggcgccctttggccaccttggagtacgactccatgagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3937 agaagaattacgcactacagcggcgccctttggccaccttggagtacgactccatgagag 3996
Query: 481 ttggtgtttttcctggggatccgaaattggaagcccttccattcccttataatttcaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3997 ttggtgtttttcctggggatccgaaattggaagcccttccattcccttataatttcaaga 4056
Query: 541 ccatcagatctccgagaccttttattccaaggatgtctcataaccatatcaactcaatcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4057 ccatcagatctccgagaccttttattccaaggatgtctcataaccatatcaactcaatcc 4116
Query: 601 ttacaatacagatcgattccatatatttacaacaagtggcccgtagtgagaacatacggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4117 ttacaatacagatcgattccatatatttacaacaagtggcccgtagtgagaacatacggt 4176
Query: 661 accaaaaccgagagatatggggcacagatatatataccgacgattcggatattatattag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4177 accaaaaccgagagatatggggcacagatatatataccgacgattcggatattatattag 4236
Query: 721 tacttcaacactgtggagttttgccattttctgaaccattggatcaaaacagcaatggca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4237 tacttcaacactgtggagttttgccattttctgaaccattggatcaaaacagcaatggca 4296
Query: 781 agccatccaatgttcact 798
||||||||||||||||||
Sbjct: 4297 agccatccaatgttcact 4314
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6132
Number of Sequences: 1807
Number of extensions: 6132
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 798
length of database: 10,358,551
effective HSP length: 16
effective length of query: 782
effective length of database: 10,329,639
effective search space: 8077777698
effective search space used: 8077777698
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)